Scriptorium

  • Updated IMS Worksheet — 2018 For those that are interested, here is the spreadsheet used in the ASMS 2018 short course.  Thank Dr. Bill Siems if you see him.   Ion Mobility Cal v3
  • Animation: Improving Rp by Increasing DT Cell Length Austen has recently assembled an animation demonstrating the effect of increasing drift tube length on resolving power, calculated from peak width contributions from diffusion and gate pulse width. Click the image to view.
  • IMS Short Course Worksheet For those that are interested, here is the spreadsheet used in the ASMS 2018 short course.  Thank Dr. Bill Siems if you see him.   Ion Mobility Cal v3
  • Savitzky-Golay Smoothing GUI In an effort to create a set of simple tools that are useful for data processing and realtime analysis of data we’ve been exploring a range of tools.  Granted there are a number of canned solutions in existence (e.g. National Instruments), however, to avoid the long-term challenges of compatibility we are looking for tools that ...
  • Venn Diagram Widgets Generally, it is recommended to avoid qualitative measures when quantitative solutions exist.  However, if the genuine need arises here are a list of useful Venn diagram widgets that may be found online: Quite Powerful:  http://bioinformatics.psb.ugent.be/webtools/Venn/ Simple Solution: http://www.bioinformatics.lu/venn.php Downloadable:  http://pcarvalho.com/patternlab/vennDiagram.shtml
  • Gantt Charts in Matplotlib Love it or hate it, the lack of a tractable options to create Gantt charts warrants frustration at times.  A recent post on Bitbucket provides a nice implementation using matplotlib and python as a platform.  In order to expand the basic functionality a few modifications enable a set of features that highlight the relative contributions of ...
  • XKCD-style Plots in Matplotlib Now incorporated directly into the latest version of matplotlib (v1.3) here is a great alternative that brings some style to your plotting routines. I haven’t tried it out on plots with a huge number of points but I imagine it should work just fine.  Below are some simple examples.  Simple as matplotlib.pyplot.xkcd()… Pseudo-Random Sequence with XKCD: No ...

 

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